About the projectThe h5py package is a Pythonic interface to the binary data format.It lets you store huge amounts of numerical data, and easily manipulate that data from NumPy. For example, you can slice into multi-terabyte datasets stored on disk, as if they were real NumPy arrays. Thousands of datasets can be stored in a single file, categorized and tagged however you want.H5py uses straightforward NumPy and Python metaphors, like dictionary and NumPy array syntax.
For example, you can iterate over datasets in a file, or check out the.shape or.dtype attributes of datasets. You don't need to know anything special about HDF5.In addition to the easy-to-use high level interface, h5py rests on a object-orientedCython wrapping of the HDF5 C API.
Almost anything you can do from C in HDF5, you can dofrom h5py.Best of all, the files you create are in a widely-used standard binary format, which you can exchange with, including those who use programs like IDL and MATLAB. Stable DownloadsAll downloads are now.Check out the.
DevelopmentAll development for h5py takes place Before sending a pullrequest, please ping the mailing list. DocumentationThe is a great place to start; you may also want to check out the.There's an, Python and HDF5, written by the lead author of h5py, Andrew Collette.General questions are always welcome on the.
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InstallationIt is highly recommended that you use a pre-built version of h5py, either from aPython Distribution, an OS-specific package manager, or a pre-built wheel fromPyPI.Be aware however that most pre-built versions lack MPI support, and that theyare built against a specific version of HDF5. If you require MPI support, ornewer HDF5 features, you will need to build from source.After installing h5py, you should run the tests to be sure that everything wasinstalled correctly. This can be done in the python interpreter via. Source installationTo install h5py from source, you need three things installed:. A supported Python version with development headers. HDF5 1.8.4 or newer with development headers. A C compilerOn Unix platforms, you also need pkg-config unless you explicitly specifya path for HDF5 as described in.OS-specific instructions for installing HDF5, Python and a C compiler are in the next fewsections.Additional Python-level requirements should be installed automatically (whichwill require an internet connection).The actual installation of h5py should be done via.